Template:Infobox protein family/sandbox

Infobox protein family/sandbox
Identifiers
Symbol	?

Template documentation[view] [edit] [history] [purge]

This is template for a protein family/domain as defined in biological databases such as Pfam.

Usage

To use this template, copy the following text and paste it at the top of your article. Fill in as many fields as possible, but don't worry if some information is missing.

<syntaxhighlight lang="wikitext">

Identifiers
Symbol	?

</syntaxhighlight>

Examples

The following filled in Pfam infobox template produces the information box to the right.

Ligand-binding domain (LBD)
RORγ (PDB: 3L0L​)
Identifiers
Symbol	Hormone_recep
Pfam	PF00104
ECOD	188.1.1.1
InterPro	IPR000536
SMART	SM00430
CATH	1lbd
SCOP2	1lbd / SCOPe / SUPFAM
CDD	cd06157
Available protein structures: Pfam   structures / ECOD   PDB RCSB PDB; PDBe; PDBj PDBsum structure summary

<syntaxhighlight lang="wikitext">

Ligand-binding domain (LBD)
RORγ (PDB: 3L0L​)
Identifiers
Symbol	Hormone_recep
Pfam	PF00104
ECOD	188.1.1.1
InterPro	IPR000536
SMART	SM00430
CATH	1lbd
SCOP2	1lbd / SCOPe / SUPFAM
CDD	cd06157
Available protein structures: Pfam   structures / ECOD   PDB RCSB PDB; PDBe; PDBj PDBsum structure summary

</syntaxhighlight>

Maintenance

• Category:Protein pages needing a picture

TemplateData

This is the TemplateData for this template used by TemplateWizard, VisualEditor and other tools. See a monthly parameter usage report for Template:Infobox protein family in articles based on its TemplateData.

TemplateData for Infobox protein family

This is template for a protein family/domain as defined in biological databases such as Pfam.

Template parameters[Edit template data]

Parameter		Description	Type	Status
Symbol	Symbol	no description	Line	optional
Name	Name	no description	Line	optional
Image	image	fill in "NONE" if not needed to suppress the tracking category	File	optional
Width	width	Width for image	String	optional
Caption	caption	Caption for image	String	optional
InterPro family identifier	InterPro	no description	Unknown	optional
Pfam family identifier	Pfam	Auto-links to Pfam family record	Line	optional
Pfam clan identifier	Pfam_clan	Auto-links to Pfam clan record; a clan is a group of related families (~superfamily).	Line	optional
ECOD identifier	ECOD	Auto-links to the ECOD database	Line	optional
Interpro identifier	Interpro	Auto-links to an Interpro entry	Line	optional
SMART accession number	SMART	Auto-links to a domain entry in the Simple Modular Architecture Research Tool	Line	optional
PROSITE record identifier	PROSITE	Auto-links to a PROSITE record search	Line	optional
MEROPS record identifier	MEROPS	Auto-links to a MEROPS record (MEROPS is scoped to peptidases and their inhibitors)	Line	optional
SCOP (domain/PDB accession number)	SCOP	Given a PDB accession number or SCOP domain name, auto-links to a SCOP and a SUPFAMpage.	Line	optional
SCOP2 override	SCOP2	SCOP and SCOP2 use different domain nomenclature. Use this value if a domain is specified for SCOP. Example 8029676	Unknown	optional
CATH (domain/PDB accession number)	CATH	Given a CATH domain ID or a PDB accession number, auto-links to CATH (Classification of Protein Structural Domains).	Line	optional
TCDB identifier	TCDB	Auto-links to an identifier search in the Transporter Classification Database	Line	optional
OPM superfamily identifier	OPM family	Auto-links to a superfamily record in the database of Orientations of Proteins in Membranes.	Line	optional
OPM protein identifier	OPM protein	Value will typically be a PDB identifier; auto-links to a protein record in the database of Orientations of Proteins in Membranes	Line	optional
CAZy family identifier	CAZy	Auto-links to a family description page in the database of Carbohydrate-Active enZYmes.	Line	optional
CDD uid	CDD	Auto-links to a record in the Conserved Domain Database	Line	optional
align	align	no description	Unknown	optional
image_size	image_size	no description	Unknown	optional
alt	alt	no description	Unknown	optional
Membranome superfamily	Membranome superfamily	no description	Unknown	optional
Membranome family	Membranome family	no description	Unknown	optional
class	class	infobox class Example mw-collapsible mw-collapsed	Unknown	optional
below	below	footnotes	Unknown	optional
PDB	PDB	PDB examples. Only use if all of: no image is available, no CATH/SCOP examples, InterPro or PDB search fails.	Content	deprecated

The above documentation is transcluded from Template:Infobox protein family/doc. (edit | history)
Editors can experiment in this template's sandbox (edit | diff) and testcases (edit) pages.
Add categories to the /doc subpage. Subpages of this template.